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Hacking COVID-19 — Course 5: Tracing SARS-CoV-2's Evolution

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  • Week 1
    • In Chapter 7, we will discuss how we can use rooted and dated phylogenetic trees to study the emergence of a virus, with the origins of COVID-19 as our primary inspiration, but with a real case study about HIV transmission as our focus.
  • Week 2
    • In Chapter 8, we will perform multiple sequence alignment, phylogenetic inference, tree rooting, and tree dating to investigate the "Italy First" hypothesis of COVID-19 origins.